Genetic change occurs in the U.S. Holstein population through the heavy use of specific bulls for a relatively short period of time. By focusing on a specific time-period, we were able to group a high percentage of the descendants of several prominent bulls into five different clusters. The average Fst across clusters was 0.03. Comparison between clusters revealed a heterogeneous mixture of allele frequency changes with varying degrees of magnitude and direction. Non-parallel responses between families suggests alternative goals and/or non-additive gene action. SNP effects for the trait stature were estimated independently for the five clusters and used to predict additive breeding values (BV). Correlations of within-cluster BVs with BVs based upon all animals combined varied from 0.70 to 0.88. By stratifying a population into subpopulations, family specific SNPs can be identified and used to increase or maintain genetic diversity.
Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP)
Technical and species orientated innovations in animal breeding, and contribution of genetics to solving societal challenges
EditorsR.F. Veerkamp and Y. de Haas
Published: 2022 Pages: 3364
eISBN: 978-90-8686-940-4
Book Type: Conference Proceedings
211. Population structure of U.S. Holsteins allows for a snapshot of allele frequency changes and family specific SNPs
T.J. Lawlor Related information
1Holstein Association USA Inc., 1 Holstein PI, Brattleboro, VT 05301, USA.
*Corresponding author: tlawlor@holstein. com
, Y. Steyn Related information*Corresponding author: tlawlor@holstein.
2University of Georgia, 425 River Road, Athens, GA 30605, USA.
, S. Tsuruta Related information2University of Georgia, 425 River Road, Athens, GA 30605, USA.
, Y. Masuda Related information2University of Georgia, 425 River Road, Athens, GA 30605, USA.
, D.A.L. Lourenco Related information2University of Georgia, 425 River Road, Athens, GA 30605, USA.
, I. Misztal Related information2University of Georgia, 425 River Road, Athens, GA 30605, USA.
Pages: 898 - 901
Published Online: February 09, 2023
Abstract: